Browse of TCMCG056C02840 protein

CDS

Accession Number	TCMCG056C02840
gbkey	CDS
Protein Id	XP_031397155.1
Location	complement(join(21251578..21253053,21253569..21253718,21253944..21254024,21254563..21254679,21254768..21254920,21256107..21256250,21256337..21256703,21257372..21257539,21257883..21258109,21258789..21258889,21259519..21259582))
Gene	LOC116208073
GeneID	116208073
Organism	Punica granatum

Protein

Length	1015aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA580467
db_source	XM_031541295.1
Definition	pre-mRNA-processing factor 39 isoform X1 [Punica granatum]

EGGNOG-MAPPER Annotation

COG_category	A
Description	at prp39-2,prp39-2
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko03041        [VIEW IN KEGG]
KEGG_ko	ko:K13217        [VIEW IN KEGG]
EC	-
KEGG_Pathway	-
GOs	GO:0000243        [VIEW IN EMBL-EBI] GO:0000245        [VIEW IN EMBL-EBI] GO:0000375        [VIEW IN EMBL-EBI] GO:0000377        [VIEW IN EMBL-EBI] GO:0000395        [VIEW IN EMBL-EBI] GO:0000398        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005681        [VIEW IN EMBL-EBI] GO:0005684        [VIEW IN EMBL-EBI] GO:0005685        [VIEW IN EMBL-EBI] GO:0006139        [VIEW IN EMBL-EBI] GO:0006376        [VIEW IN EMBL-EBI] GO:0006396        [VIEW IN EMBL-EBI] GO:0006397        [VIEW IN EMBL-EBI] GO:0006725        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0008380        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0010467        [VIEW IN EMBL-EBI] GO:0016043        [VIEW IN EMBL-EBI] GO:0016070        [VIEW IN EMBL-EBI] GO:0016071        [VIEW IN EMBL-EBI] GO:0022607        [VIEW IN EMBL-EBI] GO:0022613        [VIEW IN EMBL-EBI] GO:0022618        [VIEW IN EMBL-EBI] GO:0030532        [VIEW IN EMBL-EBI] GO:0032991        [VIEW IN EMBL-EBI] GO:0034622        [VIEW IN EMBL-EBI] GO:0034641        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0043933        [VIEW IN EMBL-EBI] GO:0044085        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044422        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044428        [VIEW IN EMBL-EBI] GO:0044446        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0045292        [VIEW IN EMBL-EBI] GO:0046483        [VIEW IN EMBL-EBI] GO:0065003        [VIEW IN EMBL-EBI] GO:0071004        [VIEW IN EMBL-EBI] GO:0071010        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0071826        [VIEW IN EMBL-EBI] GO:0071840        [VIEW IN EMBL-EBI] GO:0090304        [VIEW IN EMBL-EBI] GO:0097525        [VIEW IN EMBL-EBI] GO:0120114        [VIEW IN EMBL-EBI] GO:1901360        [VIEW IN EMBL-EBI] GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGGAGGTGGAGCCTCAGCAGACTTCTCATCCAGTGGCAGAGTCTCACTCTCAATCCACTGAAAATGGATTTGATGATAACAGACTACGCGAAGTTATTGCTAGTGGCTCGTTGGGTTTTGATGATTGGACTTCCCTCATTTCTCACATTGAAGATGTGTCTCCTGACATAGAGAGACTATGCTTAGTGTATGACTCTTTCTTGACCAAGTTTCCTCTGTGCCATGTTTACTGGAGGAAGTATACTGATCACAAGATGAGACTATGTGGTACTGACAAGGTTGTCGAAGTATTTGAGCGAGGTGTGCTCGCAGTGACTTATTCTGTTGGCCTCTGGGTTAACTACTGTCAATTTGCTTCGTCAGTTTTTGAGGATCCCGATGATGTCCGTAGATTGTTTAAGAGGGCCATATCGTTTGTCGGAAAGGATTACTCATGCCATTCCTTGTGGGATTTGCATATTGAGTTTGAGTTTTCTCAGCAGCACTGGAGTTCCCTGGCCCACATTTTTATCCAAACTCTGAGGTTTCCCACCAAAAGGTTGCACCATTATTATGAAAGTTTCCAGAAGTTGGTTACCATTTGGGAAGAAGAGATGGAAACCCAAAAAATTTCTGCCGTTGGACCCAAGCCAGAGGCTGATCTCGATAATGTGGCGCAAGCATCATATGGTGATGAGGAAATCTGTGATGTCATTAGCAAATTATTGCATTCTTCTGATGGTCATACAATGTCAAGGGAACTACAGAAATATAAAGCTATAGGAGAACGGTTATATAAGAATTCGTGTCTCTTGGATGAGAAAATTGTCTGCTTTGAGTCTAATATCCACAGATCTTATTTCCATGTGAAGCCATTAGACACCAGTCAGTTGGAGAACTGGCATAAGTATCTGGATTTCGTCGAGGCGCAAAAGGATTTCGACTGGGTAGTTAAACTTTATGAGCGATGTTTAATTCCTGCCGCAAATTATTGTGAGTTCTGGATGCGGTATGTGGCCTACATGGAAAGTAAAGGAGGGAGAGAGATAGCAAACTTTGCATTGGACCGAGCAACAGAGATCTTTCTGAAGGATATTCCCATAATCCATGTATACAATTCCAGGTTTAAGGAGGCCAGCGGGGACATAATGGGTGCCCGGGCTGCCATGCTTCGCCATAAGACTGAATCAGATGAGAACTTTGTGGACAATGCCATAATAAAAGCTAGCATGGAGAAACGCTTGGGAAACCTTACAGCAGCTTCCAACATATACTGTGAAGCCATTGATAGGGCCATATCGAAGGAGGAGCTGAATTTGCTTCCTACTTTATATGTGCATTACTCTCAGCACCTATCTGTGACGACTAACTCTGCAGTTGCAGCAAGAGACATCCTGATAAACGGTATCAAACATATGCCTAGTTGCAAATTCCTGTACGAGGAATTGATAAAATTTGCAACAACGCATGGGGGGCAAGAGCACATTGATGTAGTTGGAAGCATCGTAGCTGCTGCTTTGTCCACAATTCCCGGTGAATCCCAAGTCCTAGATTCAACAGATCAGAAGGATATATCAAACCTATATTTAAAGTTTGTTGATCATTGTGGAACAATTTATGACATAAGGAAAGCATGGAGTCGGCATGTGAAAATATTTCCTTGCTTGCTACGAGTGCCATATGAAAGCCCACCAACAGGGATAAAAAGTTGGAAATCTTTACTGGAAGGGAAACATAAAACTTATGCTGACAAGCCTTCTGAGTCAATAAGCATACAACCGGAGGAAACATCATTGCCTGAACATGCTGCTTTTCGGCCCAAGTTAGGATCAGTAGGTAATGCTTCATCTGAGAGACGTCACCAGGCATCAAATATGTCATCAGAGCAATCAATGGAAAATGAGGCCGAGTCAGTTCAAGTGCCTCAAAAGTGTATGGAAGGAGACAATACTGGATCAAATCATGACTGTTTGGTCAATCAGTCCCATTTGCCGGTTGCACTCAAAACACCTTTCCTAGATCCTCCAAAAGGTGGACCTTCTCGTTCAGTATCAGATGGTTCTCATGAAGGCGAAGATCCTGAAGAGATTTCCGTGTCTAATCGGGTTGTATCGAGTGAGAACATTGCTGAGATTCATGCCTCTGATCAAGCTGAAGGTCAAAGAACAGTTAGTCCTCCCCCATACTCATCAAGTCAACAAAATCAAAACCATAGTTCTTTTGAATCACGATCACGATGGCATCGGATGAATCACTCTGACCGATCTCGTCAGGACTCGAGATTTGGGTTCCGTGGACAATTACGGAGAAGACCACATCACCACCAGCAGTTGTATCCCCCTCAACCAGAGTCTCCTCTTACAGAGACGGGACACACTTCATTTCCTCCCCAGAATCAACAAATTCATTTAGGAAATAATAATGGCAATCAGCTTCAAGCCTGGCCCACCCTAAATTACAACTTTGCTCCGGGGTATCGGGGCCAAGTGTTTGCACAAAATGTGACATATCCTCAAGTTCAATTCCCGAACTATCCTGCCTTGCAAGGTAGCGAGCAGAGTGGGGCAGAGTTAGAGAGCAATCAAGCACATTACAATCAGATGTGGCAATACTATTACTATTACCAGCAGCAGCAACTCTTCATTCAGCAGCAGATGCAGCAGCTAGAGCTGACACAAGCTCAACTTCAACAGCAACAGCAGAGTCCCGAGTACCAACACGTCTTGCAGCAGCTTAATCAACTGCAGCACCAGCAACAGCAACTTTATCAGCTGCAGCAGCAGCTCTATCAGCAGCTGCAGACGCAGCAGCAGCTTGTACCGCAGCAGCAGTCACATCAAGGCATGCAAGTTTCGCAGCAGGATCAGCTTTTCTACATGCCGCTGCAGCAGCAACTTTCACAGCAGCAAGAATCGTTCCTGCAGCAGCAGTTCAGCCAGTCGGATCAGCTGCAAGTTCAGCAAAATCAGGAGTCAAATCTACAGCTGCAGCGGCAAAGAGTTGAAGAGGAAGGTCTAAAGGAGGAAGAGGAAGCCAAAAAAGTGCACCAGCCCCAAAGTACACCATGA

Protein:   MEVEPQQTSHPVAESHSQSTENGFDDNRLREVIASGSLGFDDWTSLISHIEDVSPDIERLCLVYDSFLTKFPLCHVYWRKYTDHKMRLCGTDKVVEVFERGVLAVTYSVGLWVNYCQFASSVFEDPDDVRRLFKRAISFVGKDYSCHSLWDLHIEFEFSQQHWSSLAHIFIQTLRFPTKRLHHYYESFQKLVTIWEEEMETQKISAVGPKPEADLDNVAQASYGDEEICDVISKLLHSSDGHTMSRELQKYKAIGERLYKNSCLLDEKIVCFESNIHRSYFHVKPLDTSQLENWHKYLDFVEAQKDFDWVVKLYERCLIPAANYCEFWMRYVAYMESKGGREIANFALDRATEIFLKDIPIIHVYNSRFKEASGDIMGARAAMLRHKTESDENFVDNAIIKASMEKRLGNLTAASNIYCEAIDRAISKEELNLLPTLYVHYSQHLSVTTNSAVAARDILINGIKHMPSCKFLYEELIKFATTHGGQEHIDVVGSIVAAALSTIPGESQVLDSTDQKDISNLYLKFVDHCGTIYDIRKAWSRHVKIFPCLLRVPYESPPTGIKSWKSLLEGKHKTYADKPSESISIQPEETSLPEHAAFRPKLGSVGNASSERRHQASNMSSEQSMENEAESVQVPQKCMEGDNTGSNHDCLVNQSHLPVALKTPFLDPPKGGPSRSVSDGSHEGEDPEEISVSNRVVSSENIAEIHASDQAEGQRTVSPPPYSSSQQNQNHSSFESRSRWHRMNHSDRSRQDSRFGFRGQLRRRPHHHQQLYPPQPESPLTETGHTSFPPQNQQIHLGNNNGNQLQAWPTLNYNFAPGYRGQVFAQNVTYPQVQFPNYPALQGSEQSGAELESNQAHYNQMWQYYYYYQQQQLFIQQQMQQLELTQAQLQQQQQSPEYQHVLQQLNQLQHQQQQLYQLQQQLYQQLQTQQQLVPQQQSHQGMQVSQQDQLFYMPLQQQLSQQQESFLQQQFSQSDQLQVQQNQESNLQLQRQRVEEEGLKEEEEAKKVHQPQSTP